BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019A01SP1|AL427406
(895 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig554 1344 0.0
>3x_Contig554
Length = 2596
Score = 1344 bits (673), Expect = 0.0
Identities = 704/721 (97%)
Strand = Plus / Plus
Query: 10 aacnaattattttcaattcattattcgcgaaactgcgtcgagcaagcctaaagtatatat 69
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1876 aacaaattattttcaattcattattcgcgaaactgcgtcgagcaagcctaaagtatatat 1935
Query: 70 cagtgttttcgataaagacgaaaggattgatcttcagtttggtagaagggtagctgcttt 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1936 cagtgttttcgataaagacgaaaggattgatcttcagtttggtagaagggtagctgcttt 1995
Query: 130 cctattaaaacaaccgaaaagaacaatgtgggactccaaagtatgtttccaaaccaaaca 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1996 cctattaaaacaaccgaaaagaacaatgtgggactccaaagtatgtttccaaaccaaaca 2055
Query: 190 acaagaagagaaagatgtttcaaatttccagcgggcatataagamtttcgatttcacttt 249
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 2056 acaagaagagaaagatgtttcaaatttccagcgggcatataagaatttcgatttcacttt 2115
Query: 250 gaaataagtggccgaagaaggtacccaatagaagtatcgttcacaatcgccttttatttg 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2116 gaaataagtggccgaagaaggtacccaatagaagtatcgttcacaatcgccttttatttg 2175
Query: 310 aagatagaattctataaactaaccaatatgtagcagtattattaccgaatatmattmtyt 369
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |
Sbjct: 2176 aagatagaattctataaactaaccaatatgtagcagtattattaccgaatataattattt 2235
Query: 370 mccyccctscmttactagacaagttgnaatgtaaaatctccaaattttatccctgaagac 429
| | ||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2236 aattaaatgcattactagacaagttgaaatgtaaaatctccaaattttatccctgaagac 2295
Query: 430 cgtyattttcgtcatcttcatcaagatctatctttcgtttaccagaatttctcatgttgg 489
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2296 cgtcattttcgtcatcttcatcaagatctatctttcgtttaccagaatttctcatgttgg 2355
Query: 490 cgatcttagtggtattcacttgcttcttcacttttctagtcatcttttcaatttgctgtt 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2356 cgatcttagtggtattcacttgcttcttcacttttctagtcatcttttcaatttgctgtt 2415
Query: 550 caacatcttctggatcctgttcaacaaactccatgacaagtctacgacctagcaaatgga 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2416 caacatcttctggatcctgttcaacaaactccatgacaagtctacgacctagcaaatgga 2475
Query: 610 caccttgtaattgatccatggcattctcagcttcctttggcaagaggaactcaacaaagg 669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2476 caccttgtaattgatccatggcattctcagcttcctttggcaagaggaactcaacaaagg 2535
Query: 670 caaaacctctagctgatttgtcgaacttctttggaactcttacagatttcaattggccaa 729
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2536 caaaacctctagctgatttgtcgaacttctttggaactcttacagatttcaattgggcaa 2595
Query: 730 a 730
|
Sbjct: 2596 a 2596
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8823
Number of Sequences: 1807
Number of extensions: 8823
Number of successful extensions: 90
Number of sequences better than 1.0e-20: 1
length of query: 895
length of database: 10,358,551
effective HSP length: 16
effective length of query: 879
effective length of database: 10,329,639
effective search space: 9079752681
effective search space used: 9079752681
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.3 bits)